default long ranger pipeline Search Results


mapping pipeline  (Arima Genomics Inc)
96
Arima Genomics Inc mapping pipeline
Mapping Pipeline, supplied by Arima Genomics Inc, used in various techniques. Bioz Stars score: 96/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mapping pipeline/product/Arima Genomics Inc
Average 96 stars, based on 1 article reviews
mapping pipeline - by Bioz Stars, 2026-06
96/100 stars
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long ranger  (10X Genomics)
86
10X Genomics long ranger
Long Ranger, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/long ranger/product/10X Genomics
Average 86 stars, based on 1 article reviews
long ranger - by Bioz Stars, 2026-06
86/100 stars
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long ranger align pipeline  (10X Genomics)
86
10X Genomics long ranger align pipeline
Long Ranger Align Pipeline, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/long ranger align pipeline/product/10X Genomics
Average 86 stars, based on 1 article reviews
long ranger align pipeline - by Bioz Stars, 2026-06
86/100 stars
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longranger basic  (10X Genomics)
86
10X Genomics longranger basic
Longranger Basic, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/longranger basic/product/10X Genomics
Average 86 stars, based on 1 article reviews
longranger basic - by Bioz Stars, 2026-06
86/100 stars
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mcrpc cohort  (10X Genomics)
86
10X Genomics mcrpc cohort
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Mcrpc Cohort, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mcrpc cohort/product/10X Genomics
Average 86 stars, based on 1 article reviews
mcrpc cohort - by Bioz Stars, 2026-06
86/100 stars
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longranger software package  (10X Genomics)
86
10X Genomics longranger software package
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Longranger Software Package, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/longranger software package/product/10X Genomics
Average 86 stars, based on 1 article reviews
longranger software package - by Bioz Stars, 2026-06
86/100 stars
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long ranger pipeline 2 2 13  (10X Genomics)
86
10X Genomics long ranger pipeline 2 2 13
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Long Ranger Pipeline 2 2 13, supplied by 10X Genomics, used in various techniques. Bioz Stars score: 86/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/long ranger pipeline 2 2 13/product/10X Genomics
Average 86 stars, based on 1 article reviews
long ranger pipeline 2 2 13 - by Bioz Stars, 2026-06
86/100 stars
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mapping_pipeline  (myDATA GmbH)
90
myDATA GmbH mapping_pipeline
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Mapping Pipeline, supplied by myDATA GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/mapping_pipeline/product/myDATA GmbH
Average 90 stars, based on 1 article reviews
mapping_pipeline - by Bioz Stars, 2026-06
90/100 stars
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in-house pipeline  (Fulgent Genetics)
90
Fulgent Genetics in-house pipeline
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
In House Pipeline, supplied by Fulgent Genetics, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/in-house pipeline/product/Fulgent Genetics
Average 90 stars, based on 1 article reviews
in-house pipeline - by Bioz Stars, 2026-06
90/100 stars
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quantseq pipeline  (Bluebee Inc)
90
Bluebee Inc quantseq pipeline
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Quantseq Pipeline, supplied by Bluebee Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/quantseq pipeline/product/Bluebee Inc
Average 90 stars, based on 1 article reviews
quantseq pipeline - by Bioz Stars, 2026-06
90/100 stars
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pipeline extension  (TransCanada Pipelines)
90
TransCanada Pipelines pipeline extension
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Pipeline Extension, supplied by TransCanada Pipelines, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/pipeline extension/product/TransCanada Pipelines
Average 90 stars, based on 1 article reviews
pipeline extension - by Bioz Stars, 2026-06
90/100 stars
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int-transformed lab values from the qualitylab pipeline  (Quality Lab Accessories Inc)
90
Quality Lab Accessories Inc int-transformed lab values from the qualitylab pipeline
(a) Landscape of rearrangements and sequencing metrics across the <t>10XG</t> <t>WGS</t> <t>mCRPC</t> cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.
Int Transformed Lab Values From The Qualitylab Pipeline, supplied by Quality Lab Accessories Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/int-transformed lab values from the qualitylab pipeline/product/Quality Lab Accessories Inc
Average 90 stars, based on 1 article reviews
int-transformed lab values from the qualitylab pipeline - by Bioz Stars, 2026-06
90/100 stars
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Image Search Results


(a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Landscape of rearrangements and sequencing metrics across the 10XG WGS mCRPC cohort. Structural variant classification defined in STAR Methods. I.A., investigational agent.

Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

Techniques: Sequencing, Variant Assay

(a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) TDP, CDK12 alteration, and ETS-rearrangement status in 10XG WGS mCRPC cohort.

Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

Techniques:

(a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Median of normalized molecule coverage near the AR gene and enhancer in the 10XG WGS mCRPC cohort; bins containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 100 kb.

Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

Techniques:

(a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

Journal: Cell

Article Title: Structural alterations driving castration-resistant prostate cancer revealed by linked-read genome sequencing

doi: 10.1016/j.cell.2018.05.036

Figure Lengend Snippet: (a) Median of normalized read coverage near AR gene and enhancer in the ULP-WGS cfDNA mCRPC cohort (maximum tumor fraction per patient used); bin containing the enhancer overlaps with a DHS in LNCaP cells. Bin size, 500 kb.

Article Snippet: Sequencing metrics for the 10X Genomics WGS cohort (A) 10X Genomics WGS metrics for mCRPC cohort (Long Ranger Pipeline). (B) Sequencing metrics for 14 mCRPC patient and 3 healthy donor cfDNA samples subjected to deep WGS (Picard).

Techniques: